Open-source research infrastructure

Research that survives scrutiny.

Run governed computational investigations across public knowledge and private data.

ApolloBot preserves the question, protocol, evidence, code, decisions, and final artifacts in one reproducible record.

Private by defaultReproducible by designHuman approval at every exit
Investigation workspaceRunning
A
InvestigationNovel biodegradation pathway
In progress
EvidenceExperimentsArtifactsProvenancePlan
Evidence summary

312 papers and 16 internal documents form a novel pathway with linked evidence.

SourcesExperimentsArtifacts
78% confidence
Provenance graph
View full graph →

One record

Sources, experiments, decisions, and outputs stay connected.

Hard controls

Budgets, permissions, and publication gates are explicit.

Useful deliverables

Leave with evidence, a paper, and an execution path.

How it works

From question to defensible result.

A bounded workflow keeps the work inspectable without turning every decision into a meeting.

01

Frame

Define the question and success criteria.

02

Gather

Connect and synthesize public and private knowledge.

03

Test

Design experiments and run computational investigations.

04

Verify

Validate results, limits, provenance and reproducibility.

05

Deliver

Publish the paper, schematics and execution blueprint.

Read the complete workflow
Complete by default

Every investigation leaves a complete, citable trail.

Everything needed to review, reproduce, and act — assembled as inspectable artifacts, not a black box.

PaperCan an equation on enzymeAutonomous investigation · v2Abstract

A publication-ready manuscript with methods, results, figures and references.

Preview
Provenance graph

Transparent lineage from sources to claims and results.

Explore
Experimental notebook123456789

Structured records of experiments, data and observations.

Open notebook
Schematics

Architecture and process diagrams for build and deployment.

View schematics
Replication kit▸ replication_kit/ README.md environment.yml▸ data/▸ results/▸ methods/▸ notebooks/▸ scripts/ LICENSE

Everything another team needs to reproduce the result.

Download kit
Implementation blueprint01def deploy(plan):02 validate(plan.spec)03 configure(env)04 release = ship(plan)05 observe(release)06 return reproduce(release)

A practical path from finding to execution.

View blueprint
Private by default

Your research stays private.

Your organization’s knowledge, data, and results remain isolated within your secure boundary.

  • Customer data
  • Private experiments
  • Internal results
  • Proprietary models
  • Secure environment

You decide what crosses the boundary — and when.

  • Human approval
  • Artifact review
  • Redaction controls
  • Export only what's approved
Optional publication

Your contribution can become public.

When a team chooses to publish, approved findings advance the broader research community without exposing private inputs.

  • Open findings
  • Public datasets
  • Reproducible methods
  • Shared knowledge
  • Collective progress
Deployment

One engine. Three operating models.

Use the same research lifecycle in your infrastructure, our private cloud, or a managed program.

Self-host

Operate ApolloBot in your own environment.

  • Apache 2.0 core
  • Your compute and storage
  • Community support
Install the engine
Apollo Cloud

A dedicated workspace managed by ApolloBot.

  • Private compute
  • Team controls and metering
  • Managed updates
View cloud plans
Managed R&D

A scoped program run with your team.

  • Research design
  • Execution and review
  • Publication-ready package
Explore managed R&D
Trust model

Scientific controls, not decorative badges.

Isolation

Separate environments for each organization.

Access

Named roles and explicit permissions.

Provenance

Receipts for sources, code, models, and decisions.

Approval

Human review before external actions.

Start with one question

Build the evidence before the decision.

Scope a private investigation or inspect the open-source engine.